Every biomarker tracked. Every intervention measured.
View all 150+ biomarkersTSH
TPO Antibodies
Morning Cortisol
LDL Particles
Vitamin D
7 genetic mutations affecting methylation and detox.
70% reduced methylation capacity
Impaired B12 recycling
Rapid homocysteine conversion
Slow catecholamine clearance
Reduced vitamin D sensitivity
46 supplements. 4 therapies.
Each supplement targets a specific dysfunction identified through testing.
Armour Thyroid
Thyroid hormone replacement for Hashimoto's hypothyroidism
L-Glutamine
Gut barrier repair, intestinal permeability healing
Amazon
SunButyrate
Short-chain fatty acid for gut lining and enterocyte fuel
Amazon
Methylcobalamin B12
MTR/MTRR mutations - impaired B12 recycling
Amazon
Vitamin D3+K2
VDR mutation - reduced vitamin D sensitivity
Amazon
Liposomal Vitamin C
Immune support, adrenal health, HPA axis
Amazon
L-Lysine
EBV viral suppression (high lysine/low arginine)
Amazon
Mitopure (Urolithin A)
Mitophagy activation, mitochondrial renewal
Amazon
Fish Oil (Omega-3)
Inflammation reduction, cardiovascular health
Amazon
LMNT Electrolytes
Electrolyte balance, hydration, adrenal support
Amazon
Red Light Therapy
Mitochondrial function, thyroid support, tissue healing
Amazon
Truvaga
Vagus nerve stimulation for HRV, sleep, and parasympathetic tone
Amazon
Berberine
Antimicrobial, blood sugar regulation, gut pathogen control
Amazon
Monolaurin
Antimicrobial from lauric acid, biofilm disruption
Amazon
Bifido Maximus
High-potency Bifidobacterium probiotic for reseeding
Amazon
HMO Prebiotic
Human milk oligosaccharides to selectively feed Bifidobacterium
Amazon
Guttides (BPC-157 + KPV)
Combined BPC-157 and KPV peptides for gut barrier repair and mucosal inflammation
AmazonThymosin Alpha-1
Immune modulation, T-cell regulation for autoimmune support
TB-500
Tissue repair, inflammation reduction, wound healing peptide
Pomegranate Extract
Blautia suppression, urolithin A production for mitochondria
Amazon
EGCG (Green Tea Extract)
Blautia suppression, antioxidant, anti-inflammatory polyphenol
Amazon
PHGG
Partially hydrolyzed guar gum to feed butyrate-producing bacteria
Amazon
Arabinogalactan
Prebiotic fiber to feed butyrate-producing bacteria
Amazon
Clostridium butyricum
Spore-forming butyrate producer to restore butyrate production
Amazon
MegaSporeBiotic
Spore-based probiotic for gut barrier integrity and microbiome diversity
Amazon
Saccharomyces boulardii
Beneficial yeast for fungal balance and gut immune function
Amazon
Allicin (Garlic Extract)
Selective antimicrobial for pathogen control, biofilm disruption
Amazon
N-Acetyl Glucosamine
Gut mucosal barrier repair, joint and cartilage support
Amazon
Hyaluronic Acid
Joint lubrication, skin hydration, connective tissue support
AmazonThis is not medical advice. I am not a doctor. Everything shared here reflects my personal experience and experimentation. Consult a qualified healthcare provider before starting any supplement or health protocol.
Strict AIP + high lysine protocol.
Complete elimination of inflammatory triggers to heal the gut, suppress viral activity, and reduce autoimmune inflammation.
Deep dives on what I'm learning.
Evolution Doesn't Care About You
Category errors, fitness functions, and why your “broken” genes aren't broken.
Eating Like the Inuit
How I hit a 10% Omega-3 Index (top 5% globally) with 10oz of wild salmon daily and no supplements.
My Gut Was Destroying Me From the Inside Out
How a Staphylococcus overgrowth at the 99.9th percentile was driving my autoimmune cascade, and the protocol that started reversing it.
One root cause. Every system failed.
The May 2025 panel wasn't a random collection of issues — it was a stress signature. Three years of chronic stress triggered a cascade that depleted every system simultaneously.
3 years of chronic stress
A major life stressor sustained for approximately three years. Required 11+ hours of sleep daily. The body was in survival mode.
Cortisol collapse
Sustained stress depleted the HPA axis. Morning cortisol hit 0.49 ng/mL — barely detectable. The adrenals were exhausted, unable to mount a proper stress response.
Immune regulation breaks down
Without cortisol to regulate it, the immune system lost its brakes. T-cell regulation failed. The body could no longer distinguish self from threat.
EBV reactivates
Epstein-Barr virus, dormant since a 2016 mono infection, reactivated. The weakened immune system couldn't keep it suppressed.
Autoimmune cascade triggered
EBV shares molecular structures with thyroid tissue — molecular mimicry. The confused immune system began attacking the thyroid (Hashimoto's) and joints (early RA).
Nutrient depletion
Chronic stress burns through zinc, magnesium, vitamin D, and CoQ10. Every cofactor the immune system needed to self-correct was depleted.
Gut barrier collapses
Stress + nutrient depletion broke down the intestinal barrier. Staphylococcus overgrew to the 99.9th percentile. Bifidobacterium crashed. The gut — where 70% of the immune system lives — became the epicenter of dysfunction.
Hormonal collapse
The final domino. Testosterone suppressed by stress and inflammation. Prolactin elevated. The endocrine system reflected the damage of every upstream failure.
The journey documented.
TA-1 Week 4 - TPO Antibodies Drop 34%
Week 4 on Thymosin Alpha-1. TPO antibodies dropped from 739→487 IU/mL (-34%), the largest sustained drop from any single intervention. Free T4 improved (1.2→1.47). Thyroglobulin antibodies improved (10→7.4). TSH stable at 2.27 (optimal range). Free T3 dipped slightly (3.5→3.0) but still normal. TA-1 appears to be directly modulating the autoimmune attack via Treg upregulation.
Started Thymosin Alpha-1 (TA-1)
Initiated TA-1 subcutaneous injections for immune modulation. TA-1 directly modulates T-cell function at the thymus level: upregulates Tregs, shifts Th1/Th2 balance, reduces autoreactive immune activity. Targeting the core autoimmune dysfunction driving Hashimoto's.
Gut Microbiome Follow-Up - Major Bifidobacterium Recovery
3-month follow-up on gut healing protocol shows dramatic Bifidobacterium recovery (+385%, from 15.5→75.3 percentile) - the primary target of Bifido Maximus supplementation. Staphylococcus reduced 32% (99.9→67.5 percentile), no longer in extreme overgrowth. Beta diversity improved 47% (66→35). However, concerns emerged: Blautia spiked 65% to 96.4th percentile (autoimmune-associated), butyrate production collapsed 75% (72→18 percentile), and total fungi increased to 88.1 percentile. Dysbiosis score unchanged at 69.8. Next phase: address new overgrowths while supporting butyrate production.
December Panel - TSH Optimal, Antibodies Persist
TSH now fully optimized at 1.22 mIU/L (-66% from Oct). Testosterone excellent at 895 ng/dL (+28%). Omega-3 index at 10% (excellent). Homocysteine improved to 7.6. However, TPO antibodies increased to 739 (+18%) and CCP to 25 (+14%) - autoimmune activity persists despite optimal thyroid function. EBV reactivation worsening (36.2, +17%). Gut protocol needs more time.
Increased Armour Thyroid to 60mg
Bumped Armour Thyroid from 30mg to 60mg daily based on continued optimization. TSH was improving but wanted to push further into optimal range. No adverse effects from the increase.
First Month Thyroid Check - TSH Responding
First thyroid panel after starting Armour Thyroid 30mg in September. TSH dropped 42% (6.20→3.57 mIU/L), now in normal range. TPO antibodies also declined: 799→627 (-22%). Decided to increase dose to push TSH further into optimal range.
Started Ultra-Simplified Gut Healing Protocol
Initiated targeted gut dysbiosis treatment for Staphylococcus overgrowth and Bifidobacterium restoration. Protocol: BPC-157 (500mcg 2x/day), HMO prebiotic (15g/day), Bifido Maximus (5 caps/day), Oregano oil (4x/day), Berberine (1000mg/day), Monolaurin (2400mg/day). Expecting 12 week timeline for significant results.
October Comprehensive Panel - Major Improvements
Omega-3 index +51% (4.9→7.4%), EPA +133%. HDL +31% (49→64). LDL particles -46% (2,284→1,243). Small dense LDL -55% (544→243). Morning cortisol fully restored +697% (0.49→3.9) - HPA axis dysfunction RESOLVED. Vitamin D corrected +89% (27→51). However, TSH worsening (5.91→6.20), indicating need for thyroid medication.
Root Cause Identified - Gut Microbiome Analysis
Microbiome analysis revealed ultimate upstream driver of autoimmune cascade: extreme Staphylococcus overgrowth (99.9th percentile - higher than 999/1000 healthy adults) combined with severe Bifidobacterium deficiency (15.5th percentile). Gut dysbiosis score 69.8. This explains the entire causal chain: dysbiosis → intestinal immune activation → molecular mimicry → autoimmune attack → thyroid destruction.
Started Armour Thyroid 30mg
Initiated thyroid hormone replacement with Armour (natural desiccated thyroid) at 30mg daily. Decision made after TSH continued worsening despite all other interventions improving. Armour chosen over synthetic levothyroxine because it provides both T4 and T3. Goal is to eventually wean off as gut heals and antibodies decline.
Started High-Dose Methylation Support Protocol
Started methylation support for MTHFR/MTR/MTRR/CBS mutations: L-Methylfolate 5mg, Methylcobalamin 3mg, TMG 1.8g, NAC 600-1200mg, Liposomal Glutathione 500mg, Riboflavin 5'-Phosphate 90mg. Goal: support impaired methylation pathways, reduce homocysteine, improve detoxification capacity.
Methylation Genetic Testing - 7 Mutations Found
Comprehensive genetic panel revealed SEVEN methylation-related mutations: MTHFR (reduced folate conversion by up to 70%), MTR & MTRR (impaired B12 recycling), CBS (rapid homocysteine conversion), COMT (slow catecholamine clearance), VDR (reduced vitamin D receptor sensitivity), MAT1A (impaired SAMe production), NOS3 (reduced nitric oxide). This rare combination (<1% of population) explains severity of symptoms.
Food Sensitivity Testing - Severe Reactions Identified
IgE/IgG/IgG4 panel identified severe reactions: EGG WHITE (extreme - IgE >100), Egg Yolk (severe), Gluten (severe - IgG 34.84), Walnut (severe). High reactions to: beans, beef, whitefish, hazelnuts, tomatoes, pineapple. This explained chronic inflammation and guided strict elimination diet.
Transformation Start - Baseline Measurements
Beginning of systematic health optimization. Starting weight: 208 lbs. Symptoms: requiring 14+ hours sleep daily, chronic fatigue despite being physically active, brain fog, exercise intolerance, cold intolerance. Initiated strict elimination diet and targeted supplementation.
Function Health Panel - Initial Discovery
For years, I knew something was deeply wrong but couldn't prove it. Every doctor visit ended with 'your labs look fine.' This panel finally gave me answers: TPO antibodies at 900 (normal <35) - active thyroid attack. EBV reactivated from 2016 mono. Early RA markers positive. Morning cortisol at 0.49 (barely detectable) - adrenal collapse. Pattern B dyslipidemia with dangerous small dense LDL. Every major system was failing simultaneously.
End of 3-Year Chronic Stress Period
A major life stressor that had been ongoing for approximately 3 years finally resolved. During this period, I required 11 hours of sleep daily (vs normal 8). This chronic stress likely exacerbated autoimmune conditions and contributed to immune dysregulation. Following resolution, sleep normalized to 8 hours.
Tonsillectomy Performed
Tonsils surgically removed after becoming enlarged to the point of nearly touching. Had completed 6-week antibiotic course with no improvement. Post-surgery: morning headaches resolved completely, speech became noticeably clearer. In retrospect, tonsils likely contained EBV viral reservoirs or antibiotic-resistant Staph. Removing them reduced immediate load but infection may have migrated to gut.
Mono and Strep Co-Infection
Contracted mononucleosis (Epstein-Barr virus) and streptococcal infection simultaneously. This was a major immune system event. EBV establishes lifelong latency and can reactivate during immune stress. The 2025 testing showing active EBV reactivation indicates the virus acquired here has reactivated due to immune dysfunction from gut dysbiosis.